HL_9H3G_021

3D structure

PDB id

9H3G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

1.82 Å

Loop

Sequence

GUGAGUAAAC

Length

10 nucleotides

Bulged bases

9H3G|1|A|G|702, 9H3G|1|A|A|704

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3G|1|A|G|698
9H3G|1|A|U|699
9H3G|1|A|G|700
9H3G|1|A|A|701
9H3G|1|A|G|702
9H3G|1|A|U|703
9H3G|1|A|A|704
9H3G|1|A|A|705
9H3G|1|A|A|706
9H3G|1|A|C|707

Current chains

Chain A

Ribosomal RNA 25S

Nearby chains

Chain 3

5.8S ribosomal RNA; 5.8S rRNA

Chain AG

Large ribosomal subunit protein eL13z

Chain BO

Large ribosomal subunit protein uL24z

Chain BT

Large ribosomal subunit protein uL4z

Chain Ea

Large ribosomal subunit protein eL15z