HL_9H3G_053

3D structure

PDB id

9H3G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

1.82 Å

Loop

Sequence

U(OMC)UAAUUAG

Length

9 nucleotides

Bulged bases

9H3G|1|A|U|2296

QA status

Modified nucleotides: OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3G|1|A|U|2290
9H3G|1|A|OMC|2291
9H3G|1|A|U|2292
9H3G|1|A|A|2293
9H3G|1|A|A|2294
9H3G|1|A|U|2295
9H3G|1|A|U|2296
9H3G|1|A|A|2297
9H3G|1|A|G|2298

Current chains

Chain A

Ribosomal RNA 25S

Nearby chains

Chain BI

Large ribosomal subunit protein uL14x/uL14z/uL14y

Chain h1

Small subunit ribosomal RNA; SSU rRNA