HL_9H3G_059

3D structure

PDB id

9H3G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

1.82 Å

Loop

Sequence

UUCAGUACG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_15296.2

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

5

Unit IDs

9H3G|1|A|U|2723
9H3G|1|A|U|2724
9H3G|1|A|C|2725
9H3G|1|A|A|2726
9H3G|1|A|G|2727
9H3G|1|A|U|2728
9H3G|1|A|A|2729
9H3G|1|A|C|2730
9H3G|1|A|G|2731

Current chains

Chain A

Ribosomal RNA 25S

Nearby chains

Chain AJ

Large ribosomal subunit protein eL18x

Chain AM

Large ribosomal subunit protein eL21z/eL21y

Chain AR

60S ribosomal protein L29

Chain BD

Large ribosomal subunit protein eL42z/eL42y

Chain Ha

Large ribosomal subunit protein uL15x