HL_9H3G_075
3D structure
- PDB id
- 9H3G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.82 Å
Loop
- Sequence
- GGUGAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9H3G_075 not in the Motif Atlas
- Homologous match to HL_4V9F_072
- Geometric discrepancy: 0.1193
- The information below is about HL_4V9F_072
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.4
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 399
Unit IDs
9H3G|1|C3|G|86
9H3G|1|C3|G|87
9H3G|1|C3|U|88
9H3G|1|C3|G|89
9H3G|1|C3|A|90
9H3G|1|C3|C|91
Current chains
- Chain C3
- Ribosomal RNA 5S
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain AL
- Ribosomal protein L18ae/LX family protein
- Chain BJ
- Large ribosomal subunit protein uL16y
- Chain BR
- Ribosomal protein L30/L7 family protein
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