HL_9H3G_086

3D structure

PDB id

9H3G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

1.82 Å

Loop

Sequence

CCUGAGAAACGG

Length

12 nucleotides

Bulged bases

9H3G|1|h1|C|404, 9H3G|1|h1|G|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3G|1|h1|C|395
9H3G|1|h1|C|396
9H3G|1|h1|U|397
9H3G|1|h1|G|398
9H3G|1|h1|A|399
9H3G|1|h1|G|400
9H3G|1|h1|A|401
9H3G|1|h1|A|402
9H3G|1|h1|A|403
9H3G|1|h1|C|404
9H3G|1|h1|G|405
9H3G|1|h1|G|406

Current chains

Chain h1

Ribosomal RNA 18S

Nearby chains

Chain Aa

Small ribosomal subunit protein eS8z

Chain Ja

Small ribosomal subunit protein eS4x

Chain Ka

Small ribosomal subunit protein eS24y

Chain Ta

Small ribosomal subunit protein eS6y