HL_9H3G_089

3D structure

PDB id

9H3G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

1.82 Å

Loop

Sequence

AAUCUAAAUCCCU

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3G|1|h1|A|522
9H3G|1|h1|A|523
9H3G|1|h1|U|524
9H3G|1|h1|C|525
9H3G|1|h1|U|526
9H3G|1|h1|A|527
9H3G|1|h1|A|528
9H3G|1|h1|A|529
9H3G|1|h1|U|530
9H3G|1|h1|C|531
9H3G|1|h1|C|532
9H3G|1|h1|C|533
9H3G|1|h1|U|534

Current chains

Chain h1

Ribosomal RNA 18S

Nearby chains

Chain AB

Small ribosomal subunit protein uS4y

Chain Ka

Small ribosomal subunit protein eS24y