HL_9H3N_006

3D structure

PDB id

9H3N (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C_(L22)-~H61

Experimental method

ELECTRON MICROSCOPY

Resolution

3.69 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H3N_006 not in the Motif Atlas

Homologous match to HL_4WF9_006

Geometric discrepancy: 0.519

The information below is about HL_4WF9_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

9H3N|1|A|G|194
9H3N|1|A|A|195
9H3N|1|A|A|196
9H3N|1|A|A|197
9H3N|1|A|C|198
9H3N|1|A|A|199
9H3N|1|A|U|200
9H3N|1|A|C|201

Current chains

Chain A

23S ribosomal RNA

Nearby chains