3D structure

PDB id
9H3O (explore in PDB, NAKB, or RNA 3D Hub)
Description
50S subunit precursor C_(L22)-_GAC
Experimental method
ELECTRON MICROSCOPY
Resolution
4.54 Å

Loop

Sequence
UGUUUCGACA
Length
10 nucleotides
Bulged bases
9H3O|1|A|U|138, 9H3O|1|A|C|140
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9H3O|1|A|U|135
9H3O|1|A|G|136
9H3O|1|A|U|137
9H3O|1|A|U|138
9H3O|1|A|U|139
9H3O|1|A|C|140
9H3O|1|A|G|141
9H3O|1|A|A|142
9H3O|1|A|C|143
9H3O|1|A|A|144

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain T
Large ribosomal subunit protein uL23

Coloring options:

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