HL_9H3O_004

3D structure

PDB id

9H3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C_(L22)-_GAC

Experimental method

ELECTRON MICROSCOPY

Resolution

4.54 Å

Loop

Sequence

UGUUUCGACA

Length

10 nucleotides

Bulged bases

9H3O|1|A|U|138, 9H3O|1|A|C|140

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3O|1|A|U|135
9H3O|1|A|G|136
9H3O|1|A|U|137
9H3O|1|A|U|138
9H3O|1|A|U|139
9H3O|1|A|C|140
9H3O|1|A|G|141
9H3O|1|A|A|142
9H3O|1|A|C|143
9H3O|1|A|A|144

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain T

Large ribosomal subunit protein uL23