HL_9H3O_021

3D structure

PDB id

9H3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C_(L22)-_GAC

Experimental method

ELECTRON MICROSCOPY

Resolution

4.54 Å

Loop

Sequence

UGAAAGG

Length

7 nucleotides

Bulged bases

9H3O|1|A|A|781, 9H3O|1|A|G|784

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H3O_021 not in the Motif Atlas

Homologous match to HL_5J7L_156

Geometric discrepancy: 0.3293

The information below is about HL_5J7L_156

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87954.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

7

Unit IDs

9H3O|1|A|U|779
9H3O|1|A|G|780
9H3O|1|A|A|781
9H3O|1|A|A|782
9H3O|1|A|A|783
9H3O|1|A|G|784
9H3O|1|A|G|785

Current chains

Chain A

23S ribosomal RNA

Nearby chains