HL_9H3O_041

3D structure

PDB id

9H3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C_(L22)-_GAC

Experimental method

ELECTRON MICROSCOPY

Resolution

4.54 Å

Loop

Sequence

AGUUCAUAU

Length

9 nucleotides

Bulged bases

9H3O|1|A|U|2473

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H3O_041 not in the Motif Atlas

Homologous match to HL_9DFE_058

Geometric discrepancy: 0.2841

The information below is about HL_9DFE_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32735.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

9H3O|1|A|A|2471
9H3O|1|A|G|2472
9H3O|1|A|U|2473
9H3O|1|A|U|2474
9H3O|1|A|C|2475
9H3O|1|A|A|2476
9H3O|1|A|U|2477
9H3O|1|A|A|2478
9H3O|1|A|U|2479

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 4

Large ribosomal subunit protein bL36A