HL_9H3O_043

3D structure

PDB id

9H3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C_(L22)-_GAC

Experimental method

ELECTRON MICROSCOPY

Resolution

4.54 Å

Loop

Sequence

CUGUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H3O_043 not in the Motif Atlas

Homologous match to HL_7A0S_061

Geometric discrepancy: 0.3053

The information below is about HL_7A0S_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

9H3O|1|A|C|2551
9H3O|1|A|U|2552
9H3O|1|A|G|2553
9H3O|1|A|U|2554
9H3O|1|A|U|2555
9H3O|1|A|C|2556
9H3O|1|A|G|2557

Current chains

Chain A

23S ribosomal RNA

Nearby chains