HL_9H3P_019

3D structure

PDB id

9H3P (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C-CP_(L22)-

Experimental method

ELECTRON MICROSCOPY

Resolution

7.06 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H3P_019 not in the Motif Atlas

Homologous match to HL_9DFE_018

Geometric discrepancy: 0.5409

The information below is about HL_9DFE_018

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

9H3P|1|A|G|629
9H3P|1|A|G|630
9H3P|1|A|A|631
9H3P|1|A|A|632
9H3P|1|A|A|633
9H3P|1|A|C|634

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain L

Large ribosomal subunit protein uL15