HL_9H3P_022

3D structure

PDB id

9H3P (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C-CP_(L22)-

Experimental method

ELECTRON MICROSCOPY

Resolution

7.06 Å

Loop

Sequence

UGUUGAAAAA

Length

10 nucleotides

Bulged bases

9H3P|1|A|U|747, 9H3P|1|A|A|751, 9H3P|1|A|A|752

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H3P_022 not in the Motif Atlas

Geometric match to HL_4WF9_023

Geometric discrepancy: 0.3906

The information below is about HL_4WF9_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50204.2

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

12

Unit IDs

9H3P|1|A|U|744
9H3P|1|A|G|745
9H3P|1|A|U|746
9H3P|1|A|U|747
9H3P|1|A|G|748
9H3P|1|A|A|749
9H3P|1|A|A|750
9H3P|1|A|A|751
9H3P|1|A|A|752
9H3P|1|A|A|753

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain E

Large ribosomal subunit protein uL4