HL_9H3P_045

3D structure

PDB id

9H3P (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C-CP_(L22)-

Experimental method

ELECTRON MICROSCOPY

Resolution

7.06 Å

Loop

Sequence

GGUCGGACAUC

Length

11 nucleotides

Bulged bases

9H3P|1|A|U|2305, 9H3P|1|A|C|2306, 9H3P|1|A|A|2311

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H3P_045 not in the Motif Atlas

Homologous match to HL_9DFE_053

Geometric discrepancy: 0.521

The information below is about HL_9DFE_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3P|1|A|G|2303
9H3P|1|A|G|2304
9H3P|1|A|U|2305
9H3P|1|A|C|2306
9H3P|1|A|G|2307
9H3P|1|A|G|2308
9H3P|1|A|A|2309
9H3P|1|A|C|2310
9H3P|1|A|A|2311
9H3P|1|A|U|2312
9H3P|1|A|C|2313

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain F

Large ribosomal subunit protein uL5