HL_9H3S_060

3D structure

PDB id

9H3S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C-CP_YjgA_L22

Experimental method

ELECTRON MICROSCOPY

Resolution

4.16 Å

Loop

Sequence

UUUA

Length

4 nucleotides

Bulged bases

9H3S|1|A|U|2797

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H3S_060 not in the Motif Atlas

Geometric match to HL_6MSF_001

Geometric discrepancy: 0.3003

The information below is about HL_6MSF_001

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

9H3S|1|A|U|2796
9H3S|1|A|U|2797
9H3S|1|A|U|2798
9H3S|1|A|A|2799

Current chains

Chain A

23S ribosomal RNA

Nearby chains