HL_9H3U_044

3D structure

PDB id

9H3U (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C_H68

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

GUAACUAUAAC

Length

11 nucleotides

Bulged bases

9H3U|1|A|A|1913

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H3U_044 not in the Motif Atlas

Homologous match to HL_9DFE_046

Geometric discrepancy: 0.4223

The information below is about HL_9DFE_046

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_25847.2

Basepair signature

cWW-F-cSH-tHW-F-F-F

Number of instances in this motif group

3

Unit IDs

9H3U|1|A|G|1910
9H3U|1|A|U|1911
9H3U|1|A|A|1912
9H3U|1|A|A|1913
9H3U|1|A|C|1914
9H3U|1|A|U|1915
9H3U|1|A|A|1916
9H3U|1|A|U|1917
9H3U|1|A|A|1918
9H3U|1|A|A|1919
9H3U|1|A|C|1920

Current chains

Chain A

23S ribosomal RNA

Nearby chains