HL_9H3V_007

3D structure

PDB id

9H3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C-CP_L2-L28

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H3V_007 not in the Motif Atlas

Homologous match to HL_4WF9_008

Geometric discrepancy: 0.3685

The information below is about HL_4WF9_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_76371.1

Basepair signature

cWW-tSH-F-F-F

Number of instances in this motif group

13

Unit IDs

9H3V|1|A|C|246
9H3V|1|A|G|247
9H3V|1|A|G|248
9H3V|1|A|C|249
9H3V|1|A|G|250
9H3V|1|A|A|251
9H3V|1|A|G|252

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain L

Large ribosomal subunit protein uL15