HL_9H3V_019

3D structure

PDB id

9H3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C-CP_L2-L28

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

UUAACUG

Length

7 nucleotides

Bulged bases

9H3V|1|A|U|646

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H3V_019 not in the Motif Atlas

Homologous match to HL_4WF9_021

Geometric discrepancy: 0.3851

The information below is about HL_4WF9_021

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

9H3V|1|A|U|641
9H3V|1|A|U|642
9H3V|1|A|A|643
9H3V|1|A|A|644
9H3V|1|A|C|645
9H3V|1|A|U|646
9H3V|1|A|G|647

Current chains

Chain A

23S ribosomal RNA

Nearby chains