3D structure

PDB id
9H51 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Assembly intermediate of human mitochondrial ribosome small subunit in complex with PUS1, METTL15 and RBFA(IN conformation) (state M1)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
GCAUCCCC
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9H51|1|A|G|701
9H51|1|A|C|702
9H51|1|A|A|703
9H51|1|A|U|704
9H51|1|A|C|705
9H51|1|A|C|706
9H51|1|A|C|707
9H51|1|A|C|708

Current chains

Chain A
RNA (969-MER)

Nearby chains

Chain 0
Small ribosomal subunit protein mS34
Chain M
28S ribosomal protein S16, mitochondrial
Chain O
28S ribosomal protein S18b, mitochondrial
Chain U
28S ribosomal protein S26, mitochondrial
Chain V
28S ribosomal protein S27, mitochondrial

Coloring options:

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