HL_9H51_005

3D structure

PDB id

9H51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit in complex with PUS1, METTL15 and RBFA(IN conformation) (state M1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCUAG

Length

5 nucleotides

Bulged bases

9H51|1|A|C|793, 9H51|1|A|A|795

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H51_005 not in the Motif Atlas

Geometric match to HL_6U8D_003

Geometric discrepancy: 0.1288

The information below is about HL_6U8D_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_01957.1

Basepair signature

cWW-F

Number of instances in this motif group

18

Unit IDs

9H51|1|A|C|792
9H51|1|A|C|793
9H51|1|A|U|794
9H51|1|A|A|795
9H51|1|A|G|796

Current chains

Chain A

RNA (969-MER)

Nearby chains

Chain M

28S ribosomal protein S16, mitochondrial

Chain T

28S ribosomal protein S25, mitochondrial