3D structure

PDB id
9H51 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Assembly intermediate of human mitochondrial ribosome small subunit in complex with PUS1, METTL15 and RBFA(IN conformation) (state M1)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
UAAAUCAACAAA
Length
12 nucleotides
Bulged bases
9H51|1|A|A|1118, 9H51|1|A|A|1125
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9H51|1|A|U|1115
9H51|1|A|A|1116
9H51|1|A|A|1117
9H51|1|A|A|1118
9H51|1|A|U|1119
9H51|1|A|C|1120
9H51|1|A|A|1121
9H51|1|A|A|1122
9H51|1|A|C|1123
9H51|1|A|A|1124
9H51|1|A|A|1125
9H51|1|A|A|1126

Current chains

Chain A
RNA (969-MER)

Nearby chains

Chain B
28S ribosomal protein S2, mitochondrial
Chain D
28S ribosomal protein S5, mitochondrial
Chain S
28S ribosomal protein S23, mitochondrial
Chain a
Putative ribosome-binding factor A, mitochondrial

Coloring options:

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