HL_9H52_009

3D structure

PDB id

9H52 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit in complex with NOA1, ERAL1, METTL17, MCAT and TFB1M (state N1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H52_009 not in the Motif Atlas

Geometric match to HL_8CRE_211

Geometric discrepancy: 0.1144

The information below is about HL_8CRE_211

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

434

Unit IDs

9H52|1|A|C|1023
9H52|1|A|G|1024
9H52|1|A|A|1025
9H52|1|A|A|1026
9H52|1|A|A|1027
9H52|1|A|G|1028

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain L

28S ribosomal protein S15, mitochondrial