HL_9H6Y_023
3D structure
- PDB id
- 9H6Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Late-stage 48S Initiation Complex (LS48S IC) guided by the trans-RNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAUCAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 9H6Y|1|2|U|1057
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9H6Y|1|2|G|1050
9H6Y|1|2|A|1051
9H6Y|1|2|U|1052
9H6Y|1|2|C|1053
9H6Y|1|2|A|1054
9H6Y|1|2|G|1055
9H6Y|1|2|A|1056
9H6Y|1|2|U|1057
9H6Y|1|2|A|1058
9H6Y|1|2|C|1059
9H6Y|1|2|C|1060
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain 1
- Transfer RNA; tRNA
- Chain 3
- Linear mRNA
- Chain A
- Eukaryotic translation initiation factor 2 subunit 1
- Chain Q
- Small ribosomal subunit protein uS11
- Chain b
- Small ribosomal subunit protein eS26
- Chain o
- Eukaryotic translation initiation factor 5
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