9H6Y Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_9H6Y_001 | 1/1/14:22 | No text annotation | ||
| HL_9H6Y_002 | 1/1/31:39 | tRNA anticodon loop | homologous HL_6CFJ_107 HL_81376.3 | |
| HL_9H6Y_004 | 1/2/7:17 | No text annotation | ||
| HL_9H6Y_005 | 1/2/69:80 | No text annotation | ||
| HL_9H6Y_006 | 1/2/156:162 | No text annotation | ||
| HL_9H6Y_008 | 1/2/279:286 | No text annotation | ||
| HL_9H6Y_009 | 1/2/312:319 | No text annotation | ||
| HL_9H6Y_010 | 1/2/367:377 | No text annotation | ||
| HL_9H6Y_011 | 1/2/406:411 | No text annotation | ||
| HL_9H6Y_012 | 1/2/431:442 | No text annotation | ||
| HL_9H6Y_013 | 1/2/452:457 | No text annotation | ||
| HL_9H6Y_014 | 1/2/488:494 | No text annotation | ||
| HL_9H6Y_016 | 1/2/559:571 | No text annotation | ||
| HL_9H6Y_017 | 1/2/608:613 | No text annotation | ||
| HL_9H6Y_018 | 1/2/816:824 | No text annotation | ||
| HL_9H6Y_019 | 1/2/829:837 | No text annotation | ||
| HL_9H6Y_021 | 1/2/953:962 | No text annotation | ||
| HL_9H6Y_022 | 1/2/990:995 | No text annotation | ||
| HL_9H6Y_023 | 1/2/1050:1060 | No text annotation | ||
| HL_9H6Y_024 | 1/2/1109:1116 | No text annotation | ||
| HL_9H6Y_025 | 1/2/1137:1142 | No text annotation | ||
| HL_9H6Y_026 | 1/2/1174:1179 | No text annotation | ||
| HL_9H6Y_027 | 1/2/1241:1250 | No text annotation | ||
| HL_9H6Y_028 | 1/2/1291:1300 | No text annotation | ||
| HL_9H6Y_029 | 1/2/1349:1354 | No text annotation | ||
| HL_9H6Y_030 | 1/2/1362:1369 | No text annotation | ||
| HL_9H6Y_032 | 1/2/1456:1462 | No text annotation | ||
| HL_9H6Y_033 | 1/2/1560:1565 | No text annotation | ||
| HL_9H6Y_034 | 1/2/1609:1620 | No text annotation | ||
| HL_9H6Y_035 | 1/2/1653:1661 | No text annotation | ||
| HL_9H6Y_036 | 1/2/1841:1846 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_9H6Y_003 | T-loop with 2 stacked bulged bases | ||
| HL_9H6Y_007 | No text annotation | ||
| HL_9H6Y_015 | No text annotation | ||
| HL_9H6Y_020 | No text annotation | ||
| HL_9H6Y_031 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_9H6Y_001 | 1/2/23:25, 1/2/639:641 | No text annotation | ||
| IL_9H6Y_002 | 1/2/34:36, 1/2/509:511 | No text annotation | ||
| IL_9H6Y_003 | 1/2/37:40, 1/2/504:508 | No text annotation | ||
| IL_9H6Y_004 | 1/2/41:47, 1/2/469:471 | No text annotation | ||
| IL_9H6Y_005 | 1/2/49:51, 1/2/466:467 | No text annotation | ||
| IL_9H6Y_006 | 1/2/57:62, 1/2/86:88 | No text annotation | ||
| IL_9H6Y_007 | 1/2/63:68, 1/2/81:85 | No text annotation | ||
| IL_9H6Y_008 | 1/2/108:110, 1/2/341:343 | No text annotation | ||
| IL_9H6Y_009 | 1/2/110:112, 1/2/339:341 | No text annotation | ||
| IL_9H6Y_010 | 1/2/112:115, 1/2/338:339 | No text annotation | ||
| IL_9H6Y_011 | 1/2/116:121, 1/2/333:337 | No text annotation | ||
| IL_9H6Y_012 | 1/2/145:151, 1/2/167:174 | No text annotation | ||
| IL_9H6Y_013 | 1/2/152:154, 1/2/164:166 | No text annotation | ||
| IL_9H6Y_014 | 1/2/187:191, 1/2/204:208 | No text annotation | ||
| IL_9H6Y_016 | 1/2/213:216, 1/2/293:300 | No text annotation | ||
| IL_9H6Y_017 | 1/2/303:305, 1/2/326:327 | No text annotation | ||
| IL_9H6Y_018 | 1/2/308:311, 1/2/320:323 | No text annotation | ||
| IL_9H6Y_019 | 1/2/349:354, 1/2/386:393 | No text annotation | ||
| IL_9H6Y_020 | 1/2/356:361, 1/2/383:384 | No text annotation | ||
| IL_9H6Y_021 | 1/2/401:403, 1/2/414:419 | No text annotation | ||
| IL_9H6Y_022 | 1/2/427:429, 1/2/444:446 | No text annotation | ||
| IL_9H6Y_023 | 1/2/449:451, 1/2/458:460 | No text annotation | ||
| IL_9H6Y_024 | 1/2/477:479, 1/2/501:502 | No text annotation | ||
| IL_9H6Y_025 | 1/2/481:485, 1/2/498:499 | No text annotation | ||
| IL_9H6Y_026 | 1/2/485:486, 1/2/496:498 | No text annotation | ||
| IL_9H6Y_027 | 1/2/518:521, 1/2/543:547 | No text annotation | ||
| IL_9H6Y_028 | 1/2/522:524, 1/2/539:542 | No text annotation | ||
| IL_9H6Y_029 | 1/2/525:527, 1/2/536:538 | No text annotation | ||
| IL_9H6Y_030 | 1/2/553:555, 1/2/575:582 | No text annotation | ||
| IL_9H6Y_031 | 1/2/556:559, 1/2/571:574 | No text annotation | ||
| IL_9H6Y_032 | 1/2/589:596, 1/2/626:627 | No text annotation | ||
| IL_9H6Y_033 | 1/2/596:598, 1/2/625:626 | No text annotation | ||
| IL_9H6Y_034 | 1/2/601:607, 1/2/614:622 | No text annotation | ||
| IL_9H6Y_035 | 1/2/653:655, 1/2/1158:1160 | No text annotation | ||
| IL_9H6Y_036 | 1/2/655:661, 1/2/1157:1158 | No text annotation | ||
| IL_9H6Y_037 | 1/2/663:665, 1/2/1026:1028 | No text annotation | ||
| IL_9H6Y_038 | 1/2/666:670, 1/2/1021:1025 | No text annotation | ||
| IL_9H6Y_041 | 1/2/798:799, 1/2/856:859 | No text annotation | ||
| IL_9H6Y_042 | 1/2/801:803, 1/2/852:854 | No text annotation | ||
| IL_9H6Y_043 | 1/2/803:811, 1/2/845:852 | No text annotation | ||
| IL_9H6Y_044 | 1/2/870:872, 1/2/906:907 | No text annotation | ||
| IL_9H6Y_045 | 1/2/872:875, 1/2/903:906 | No text annotation | ||
| IL_9H6Y_046 | 1/2/918:919, 1/2/1015:1018 | No text annotation | ||
| IL_9H6Y_047 | 1/2/921:923, 1/2/1010:1013 | No text annotation | ||
| IL_9H6Y_048 | 1/2/924:927, 1/2/1006:1009 | No text annotation | ||
| IL_9H6Y_049 | 1/2/927:931, 1/2/1003:1006 | No text annotation | ||
| IL_9H6Y_050 | 1/2/938:941, 1/2/977:980 | No text annotation | ||
| IL_9H6Y_051 | 1/2/948:952, 1/2/963:970 | No text annotation | ||
| IL_9H6Y_052 | 1/2/1038:1043, 1/2/1067:1069 | No text annotation | ||
| IL_9H6Y_053 | 1/2/1043:1047, 1/2/1063:1067 | No text annotation | ||
| IL_9H6Y_054 | 1/2/1087:1089, 1/2/1148:1154 | No text annotation | ||
| IL_9H6Y_055 | 1/2/1094:1097, 1/2/1127:1130 | No text annotation | ||
| IL_9H6Y_056 | 1/2/1097:1099, 1/2/1125:1127 | No text annotation | ||
| IL_9H6Y_057 | 1/2/1104:1106, 1/2/1119:1120 | No text annotation | ||
| IL_9H6Y_058 | 1/2/1164:1171, 1/2/1182:1187 | No text annotation | ||
| IL_9H6Y_059 | 1/2/1199:1200, 1/2/1689:1691 | No text annotation | ||
| IL_9H6Y_060 | 1/2/1202:1204, 1/2/1686:1687 | No text annotation | ||
| IL_9H6Y_061 | 1/2/1210:1213, 1/2/1676:1680 | No text annotation | ||
| IL_9H6Y_062 | 1/2/1226:1228, 1/2/1521:1523 | No text annotation | ||
| IL_9H6Y_063 | 1/2/1231:1232, 1/2/1516:1518 | No text annotation | ||
| IL_9H6Y_064 | 1/2/1266:1268, 1/2/1506:1507 | No text annotation | ||
| IL_9H6Y_065 | 1/2/1277:1283, 1/2/1310:1312 | No text annotation | ||
| IL_9H6Y_066 | 1/2/1277:1286, 1/2/1305:1312 | No text annotation | ||
| IL_9H6Y_067 | 1/2/1283:1286, 1/2/1305:1310 | No text annotation | ||
| IL_9H6Y_068 | 1/2/1287:1289, 1/2/1302:1304 | No text annotation | ||
| IL_9H6Y_069 | 1/2/1321:1323, 1/2/1498:1499 | No text annotation | ||
| IL_9H6Y_070 | 1/2/1325:1329, 1/2/1494:1496 | No text annotation | ||
| IL_9H6Y_071 | 1/2/1325:1331, 1/2/1488:1496 | No text annotation | ||
| IL_9H6Y_072 | 1/2/1329:1331, 1/2/1488:1494 | No text annotation | ||
| IL_9H6Y_073 | 1/2/1333:1334, 1/2/1484:1486 | No text annotation | ||
| IL_9H6Y_074 | 1/2/1343:1345, 1/2/1376:1378 | No text annotation | ||
| IL_9H6Y_075 | 1/2/1359:1361, 1/2/1370:1371 | No text annotation | ||
| IL_9H6Y_076 | 1/2/1391:1395, 1/2/1443:1446 | No text annotation | ||
| IL_9H6Y_077 | 1/2/1398:1401, 1/2/1437:1440 | No text annotation | ||
| IL_9H6Y_078 | 1/2/1404:1407, 1/2/1431:1434 | No text annotation | ||
| IL_9H6Y_079 | 1/2/1407:1409, 1/2/1429:1431 | No text annotation | ||
| IL_9H6Y_080 | 1/2/1409:1412, 1/2/1425:1429 | No text annotation | ||
| IL_9H6Y_081 | 1/2/1413:1416, 1/2/1423:1424 | No text annotation | ||
| IL_9H6Y_082 | 1/2/1532:1534, 1/2/1589:1591 | No text annotation | ||
| IL_9H6Y_083 | 1/2/1536:1545, 1/2/1577:1587 | No text annotation | ||
| IL_9H6Y_084 | 1/2/1545:1553, 1/2/1572:1577 | No text annotation | ||
| IL_9H6Y_085 | 1/2/1555:1557, 1/2/1568:1570 | No text annotation | ||
| IL_9H6Y_086 | 1/2/1599:1605, 1/2/1624:1630 | No text annotation | ||
| IL_9H6Y_087 | 1/2/1695:1697, 1/2/1827:1830 | No text annotation | ||
| IL_9H6Y_088 | 1/2/1697:1700, 1/2/1823:1827 | No text annotation | ||
| IL_9H6Y_089 | 1/2/1701:1703, 1/2/1820:1822 | No text annotation | ||
| IL_9H6Y_090 | 1/2/1703:1707, 1/2/1815:1820 | No text annotation | ||
| IL_9H6Y_091 | 1/2/1709:1711, 1/2/1811:1813 | No text annotation | ||
| IL_9H6Y_092 | 1/2/1712:1715, 1/2/1807:1810 | No text annotation | ||
| IL_9H6Y_093 | 1/2/1715:1717, 1/2/1806:1807 | No text annotation | ||
| IL_9H6Y_094 | 1/2/1724:1726, 1/2/1797:1799 | No text annotation | ||
| IL_9H6Y_095 | 1/2/1728:1731, 1/2/1792:1795 | No text annotation | ||
| IL_9H6Y_096 | 1/2/1734:1736, 1/2/1787:1789 | No text annotation | ||
| IL_9H6Y_097 | 1/2/1737:1741, 1/2/1782:1786 | No text annotation | ||
| IL_9H6Y_098 | 1/2/1745:1746, 1/2/1776:1778 | No text annotation | ||
| IL_9H6Y_099 | 1/2/1746:1747, 1/2/1774:1776 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_9H6Y_015 | No text annotation | ||
| IL_9H6Y_039 | No text annotation | ||
| IL_9H6Y_040 | No text annotation | ||
| IL_9H6Y_100 | No text annotation | ||
| IL_9H6Y_101 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_9H6Y_001 | 1/2/40:41, 1/2/471:477, 1/2/502:504 | No text annotation | ||
| J3_9H6Y_002 | 1/2/40:47, 1/2/469:477, 1/2/502:504 | No text annotation | ||
| J3_9H6Y_003 | 1/2/220:235, 1/2/274:279, 1/2/286:289 | No text annotation | ||
| J3_9H6Y_004 | 1/2/672:675, 1/2/913:918, 1/2/1018:1019 | No text annotation | ||
| J3_9H6Y_005 | 1/2/672:675, 1/2/913:919, 1/2/1015:1019 | No text annotation | ||
| J3_9H6Y_006 | 1/2/812:815, 1/2/825:827, 1/2/839:844 | No text annotation | ||
| J3_9H6Y_007 | 1/2/934:937, 1/2/981:989, 1/2/996:1000 | No text annotation | ||
| J3_9H6Y_008 | 1/2/1090:1092, 1/2/1132:1136, 1/2/1143:1147 | No text annotation | ||
| J3_9H6Y_009 | 1/2/1214:1217, 1/2/1640:1646, 1/2/1668:1675 | No text annotation | ||
| J3_9H6Y_010 | 1/2/1221:1224, 1/2/1525:1527, 1/2/1633:1636 | No text annotation | ||
| J3_9H6Y_011 | 1/2/1233:1240, 1/2/1251:1262, 1/2/1511:1515 | No text annotation | ||
| J3_9H6Y_012 | 1/2/1268:1273, 1/2/1316:1320, 1/2/1500:1506 | No text annotation | ||
| J3_9H6Y_013 | 1/2/1336:1341, 1/2/1380:1385, 1/2/1477:1482 | No text annotation | ||
| J3_9H6Y_014 | 1/2/1346:1347, 1/2/1356:1359, 1/2/1371:1375 | No text annotation | ||
| J3_9H6Y_015 | 1/2/1387:1391, 1/2/1446:1452, 1/2/1466:1475 | No text annotation | ||
| J3_9H6Y_016 | 1/2/1527:1531, 1/2/1592:1599, 1/2/1630:1633 | No text annotation | ||
| J4_9H6Y_001 | 1/1/8:14, 1/1/22:27, 1/1/43:49, 1/1/65:66 | No text annotation | ||
| J4_9H6Y_002 | 1/2/98:106, 1/2/345:347, 1/2/395:399, 1/2/421:422 | No text annotation | ||
| J4_9H6Y_003 | 1/2/661:663, 1/2/1028:1033, 1/2/1074:1085, 1/2/1156:1157 | No text annotation | ||
| J5_9H6Y_001 | 1/2/30:34, 1/2/511:517, 1/2/548:553, 1/2/582:585, 1/2/631:634 | No text annotation | ||
| J5_9H6Y_002 | 1/2/30:34, 1/2/511:517, 1/2/548:555, 1/2/575:585, 1/2/631:634 | No text annotation | ||
| J5_9H6Y_003 | 1/2/53:56, 1/2/89:96, 1/2/424:426, 1/2/447:449, 1/2/460:464 | No text annotation | ||
| J5_9H6Y_004 | 1/2/675:680, 1/2/734:740, 1/2/793:796, 1/2/861:869, 1/2/908:913 | No text annotation |
Problematic loops
No problematic loops
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