HL_9H74_035

3D structure

PDB id

9H74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Late-stage 48S Initiation Complex with eIF3 (LS48S-eIF3 IC) guided by the trans-RNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUCAUAAGC

Length

9 nucleotides

Bulged bases

9H74|1|2|C|1655, 9H74|1|2|G|1660

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H74|1|2|G|1653
9H74|1|2|U|1654
9H74|1|2|C|1655
9H74|1|2|A|1656
9H74|1|2|U|1657
9H74|1|2|A|1658
9H74|1|2|A|1659
9H74|1|2|G|1660
9H74|1|2|C|1661

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain S

Ribosomal protein S16

Chain V

40S ribosomal protein eS19

Chain W

40S ribosomal protein uS10

Chain e

40S ribosomal protein S29