HL_9H9H_002
3D structure
- PDB id
- 9H9H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex 1 30S-IF1-IF2-IF3-GE81112
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9H9H_002 not in the Motif Atlas
- Geometric match to HL_4V90_033
- Geometric discrepancy: 0.2049
- The information below is about HL_4V90_033
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
9H9H|1|3|G|31
9H9H|1|3|C|32
9H9H|1|3|U|33
9H9H|1|3|C|34
9H9H|1|3|A|35
9H9H|1|3|U|36
9H9H|1|3|A|37
9H9H|1|3|A|38
9H9H|1|3|C|39
Current chains
- Chain 3
- t-RNA (77-MER)
Nearby chains
- Chain 2
- mRNA (5'-R(P*AP*AP*UP*G)-3')
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain I
- Small ribosomal subunit protein uS9
- Chain Z
- Translation initiation factor IF-3
Coloring options: