HL_9HA4_001
3D structure
- PDB id
- 9HA4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pooled 50S subunit C-CP_(L22)- precursor states supplemented with Api137
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.26 Å
Loop
- Sequence
- UGCUAAUCUG
- Length
- 10 nucleotides
- Bulged bases
- 9HA4|1|A|C|61
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9HA4_001 not in the Motif Atlas
- Homologous match to HL_5J7L_134
- Geometric discrepancy: 0.2274
- The information below is about HL_5J7L_134
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_35677.3
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
9HA4|1|A|U|59
9HA4|1|A|G|60
9HA4|1|A|C|61
9HA4|1|A|U|62
9HA4|1|A|A|63
9HA4|1|A|A|64
9HA4|1|A|U|65
9HA4|1|A|C|66
9HA4|1|A|U|67
9HA4|1|A|G|68
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain T
- Large ribosomal subunit protein uL23
- Chain Y
- Large ribosomal subunit protein uL29
- Chain y
- Apidaecins type 22
Coloring options: