HL_9HA5_020

3D structure

PDB id

9HA5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C_L2 precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGUAACAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9HA5_020 not in the Motif Atlas

Homologous match to HL_9DFE_020

Geometric discrepancy: 0.2995

The information below is about HL_9DFE_020

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_98423.3

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

15

Unit IDs

9HA5|1|A|G|712
9HA5|1|A|G|713
9HA5|1|A|U|714
9HA5|1|A|A|715
9HA5|1|A|A|716
9HA5|1|A|C|717
9HA5|1|A|A|718
9HA5|1|A|C|719

Current chains

Chain A

23S ribosomal RNA

Nearby chains