HL_9HA6_023

3D structure

PDB id

9HA6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mature 50S subunit supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

UUUAGG

Length

6 nucleotides

Bulged bases

9HA6|1|A|U|827, 9HA6|1|A|G|830

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9HA6_023 not in the Motif Atlas

Homologous match to HL_5J7L_157

Geometric discrepancy: 0.2552

The information below is about HL_5J7L_157

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_55195.3

Basepair signature

cWW-F

Number of instances in this motif group

6

Unit IDs

9HA6|1|A|U|826
9HA6|1|A|U|827
9HA6|1|A|U|828
9HA6|1|A|A|829
9HA6|1|A|G|830
9HA6|1|A|G|831

Current chains

Chain A

23S ribosomal rRNA

Nearby chains

Chain L

Large ribosomal subunit protein uL15