HL_9HA6_026

3D structure

PDB id

9HA6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mature 50S subunit supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

CGUAAUAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9HA6_026 not in the Motif Atlas

Homologous match to HL_9DFE_028

Geometric discrepancy: 0.3365

The information below is about HL_9DFE_028

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HA6|1|A|C|1092
9HA6|1|A|G|1093
9HA6|1|A|U|1094
9HA6|1|A|A|1095
9HA6|1|A|A|1096
9HA6|1|A|U|1097
9HA6|1|A|A|1098
9HA6|1|A|G|1099

Current chains

Chain A

23S ribosomal rRNA

Nearby chains

Chain 4

Large ribosomal subunit protein bL36A

Chain G

Large ribosomal subunit protein uL6