HL_9HA6_059

3D structure

PDB id

9HA6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mature 50S subunit supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

CUGUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9HA6_059 not in the Motif Atlas

Homologous match to HL_4WF9_058

Geometric discrepancy: 0.2186

The information below is about HL_4WF9_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

9HA6|1|A|C|2551
9HA6|1|A|U|2552
9HA6|1|A|G|2553
9HA6|1|A|U|2554
9HA6|1|A|U|2555
9HA6|1|A|C|2556
9HA6|1|A|G|2557

Current chains

Chain A

23S ribosomal rRNA

Nearby chains