HL_9HA7_023

3D structure

PDB id

9HA7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C-CP_(L22)-~H61 precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

4.37 Å

Loop

Sequence

GCUUAUGC

Length

8 nucleotides

Bulged bases

9HA7|1|A|U|1174, 9HA7|1|A|A|1175

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9HA7_023 not in the Motif Atlas

Geometric match to HL_7A0S_007

Geometric discrepancy: 0.3117

The information below is about HL_7A0S_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51020.2

Basepair signature

cWW-cSW-F

Number of instances in this motif group

14

Unit IDs

9HA7|1|A|G|1171
9HA7|1|A|C|1172
9HA7|1|A|U|1173
9HA7|1|A|U|1174
9HA7|1|A|A|1175
9HA7|1|A|U|1176
9HA7|1|A|G|1177
9HA7|1|A|C|1178

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain L

Large ribosomal subunit protein uL15