HL_9HAL_031

3D structure

PDB id

9HAL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit d126_(L29)-/(L22)- precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

4.49 Å

Loop

Sequence

GAAGACGAC

Length

9 nucleotides

Bulged bases

9HAL|1|A|A|2820

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9HAL_031 not in the Motif Atlas

Homologous match to HL_5J7L_201

Geometric discrepancy: 0.2355

The information below is about HL_5J7L_201

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.6

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

9HAL|1|A|G|2819
9HAL|1|A|A|2820
9HAL|1|A|A|2821
9HAL|1|A|G|2822
9HAL|1|A|A|2823
9HAL|1|A|C|2824
9HAL|1|A|G|2825
9HAL|1|A|A|2826
9HAL|1|A|C|2827

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain N

Large ribosomal subunit protein bL17