HL_9HAM_033

3D structure

PDB id

9HAM (explore in PDB, NAKB, or RNA 3D Hub)

Description

C_(L29)-/(L22)- precursor supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

5.06 Å

Loop

Sequence

CAGG

Length

4 nucleotides

Bulged bases

9HAM|1|A|A|1566

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9HAM_033 not in the Motif Atlas

Geometric match to HL_4L8H_001

Geometric discrepancy: 0.1313

The information below is about HL_4L8H_001

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.1

Basepair signature

cWW-F

Number of instances in this motif group

37

Unit IDs

9HAM|1|A|C|1565
9HAM|1|A|A|1566
9HAM|1|A|G|1567
9HAM|1|A|G|1568

Current chains

Chain A

23S ribosomal RNA

Nearby chains