HL_9HFO_016
3D structure
- PDB id
- 9HFO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translation-initiation state of human mitochondrial ribosome small subunit (State G)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAUAAACCCC
- Length
- 10 nucleotides
- Bulged bases
- 9HFO|1|A|C|1225
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9HFO_016 not in the Motif Atlas
- Homologous match to HL_5J7L_021
- Geometric discrepancy: 0.2725
- The information below is about HL_5J7L_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
9HFO|1|A|G|1217
9HFO|1|A|A|1218
9HFO|1|A|U|1219
9HFO|1|A|A|1220
9HFO|1|A|A|1221
9HFO|1|A|A|1222
9HFO|1|A|C|1223
9HFO|1|A|C|1224
9HFO|1|A|C|1225
9HFO|1|A|C|1226
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain 5
- fMet-tRNAMet
- Chain G
- 28S ribosomal protein S9, mitochondrial
- Chain H
- 28S ribosomal protein S10, mitochondrial
Coloring options: