HL_9HLZ_031
3D structure
- PDB id
- 9HLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUGAAGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 9HLZ|1|AA|A|1930, 9HLZ|1|AA|A|1931, 9HLZ|1|AA|G|1932
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9HLZ_031 not in the Motif Atlas
- Homologous match to HL_7A0S_049
- Geometric discrepancy: 0.2287
- The information below is about HL_7A0S_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78372.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
9HLZ|1|AA|G|1927
9HLZ|1|AA|U|1928
9HLZ|1|AA|G|1929
9HLZ|1|AA|A|1930
9HLZ|1|AA|A|1931
9HLZ|1|AA|G|1932
9HLZ|1|AA|A|1933
9HLZ|1|AA|U|1934
9HLZ|1|AA|G|1935
9HLZ|1|AA|C|1936
Current chains
- Chain AA
- 21S mitochondrial rRNA
Nearby chains
- Chain CC
- Large ribosomal subunit protein uL3m
- Chain NN
- Large ribosomal subunit protein bL21m
- Chain WW
- Large ribosomal subunit protein bL32m
- Chain cc
- Large ribosomal subunit protein mL60
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