HL_9HLZ_033

3D structure

PDB id

9HLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AAAAUU

Length

6 nucleotides

Bulged bases

9HLZ|1|AA|A|2330, 9HLZ|1|AA|U|2331

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9HLZ_033 not in the Motif Atlas

Geometric match to HL_7VTI_001

Geometric discrepancy: 0.3762

The information below is about HL_7VTI_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89167.2

Basepair signature

cWW-F-F

Number of instances in this motif group

22

Unit IDs

9HLZ|1|AA|A|2327
9HLZ|1|AA|A|2328
9HLZ|1|AA|A|2329
9HLZ|1|AA|A|2330
9HLZ|1|AA|U|2331
9HLZ|1|AA|U|2332

Current chains

Chain AA

21S mitochondrial rRNA

Nearby chains

Chain 11

Large ribosomal subunit protein mL38

Chain RR

Large ribosomal subunit protein bL27m