3D structure

PDB id
9HLZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
UUAUACUAA
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9HLZ|1|AA|U|3135
9HLZ|1|AA|U|3136
9HLZ|1|AA|A|3137
9HLZ|1|AA|U|3138
9HLZ|1|AA|A|3139
9HLZ|1|AA|C|3140
9HLZ|1|AA|U|3141
9HLZ|1|AA|A|3142
9HLZ|1|AA|A|3143

Current chains

Chain AA
21S mitochondrial rRNA

Nearby chains

Chain CC
Large ribosomal subunit protein uL3m
Chain LL
Large ribosomal subunit protein bL17m
Chain WW
Large ribosomal subunit protein bL32m

Coloring options:

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