HL_9HLZ_051
3D structure
- PDB id
- 9HLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AUUAAGAGUU
- Length
- 10 nucleotides
- Bulged bases
- 9HLZ|1|r|G|270
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9HLZ_051 not in the Motif Atlas
- Homologous match to HL_6CZR_077
- Geometric discrepancy: 0.5941
- The information below is about HL_6CZR_077
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_84299.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
9HLZ|1|r|A|263
9HLZ|1|r|U|264
9HLZ|1|r|U|265
9HLZ|1|r|A|266
9HLZ|1|r|A|267
9HLZ|1|r|G|268
9HLZ|1|r|A|269
9HLZ|1|r|G|270
9HLZ|1|r|U|271
9HLZ|1|r|U|272
Current chains
- Chain r
- 15S mitochondrial rRNA
Nearby chains
- Chain O
- Small ribosomal subunit protein uS15m
- Chain Q
- Small ribosomal subunit protein uS17m
- Chain V
- Small ribosomal subunit protein mS26
Coloring options: