HL_9HLZ_068

3D structure

PDB id

9HLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AAUUUUAAUU

Length

10 nucleotides

Bulged bases

9HLZ|1|r|A|1172, 9HLZ|1|r|U|1174, 9HLZ|1|r|U|1175, 9HLZ|1|r|U|1179

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HLZ|1|r|A|1171
9HLZ|1|r|A|1172
9HLZ|1|r|U|1173
9HLZ|1|r|U|1174
9HLZ|1|r|U|1175
9HLZ|1|r|U|1176
9HLZ|1|r|A|1177
9HLZ|1|r|A|1178
9HLZ|1|r|U|1179
9HLZ|1|r|U|1180

Current chains

Chain r

15S mitochondrial rRNA

Nearby chains

Chain I

Small ribosomal subunit protein uS9m

Chain J

Small ribosomal subunit protein uS10m

Chain Y

Small ribosomal subunit protein mS35