HL_9HM0_005

3D structure

PDB id

9HM0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGUGAAAAAAAUG

Length

13 nucleotides

Bulged bases

9HM0|1|AA|A|327

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HM0|1|AA|U|322
9HM0|1|AA|G|323
9HM0|1|AA|U|324
9HM0|1|AA|G|325
9HM0|1|AA|A|326
9HM0|1|AA|A|327
9HM0|1|AA|A|328
9HM0|1|AA|A|329
9HM0|1|AA|A|330
9HM0|1|AA|A|331
9HM0|1|AA|A|332
9HM0|1|AA|U|333
9HM0|1|AA|G|334

Current chains

Chain AA

21S mitochondrial rRNA

Nearby chains

Chain SS

Large ribosomal subunit protein bL28m

Chain ZZ

Large ribosomal subunit protein bL35m