HL_9HM0_020

3D structure

PDB id

9HM0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUAUAAAC

Length

8 nucleotides

Bulged bases

9HM0|1|AA|A|1315, 9HM0|1|AA|U|1316

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HM0|1|AA|G|1313
9HM0|1|AA|U|1314
9HM0|1|AA|A|1315
9HM0|1|AA|U|1316
9HM0|1|AA|A|1317
9HM0|1|AA|A|1318
9HM0|1|AA|A|1319
9HM0|1|AA|C|1320

Current chains

Chain AA

21S mitochondrial rRNA

Nearby chains

Chain 33

Large ribosomal subunit protein mL41

Chain LL

Large ribosomal subunit protein bL17m

Chain OO

Large ribosomal subunit protein uL22m

Chain WW

Large ribosomal subunit protein bL32m

Chain dd

Large ribosomal subunit protein mL67