HL_9HM0_075
3D structure
- PDB id
- 9HM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CAAUAUGAUGUAAUUGGUUAACAUUUUAGGGUCAUGACCUAAUUAUAUACGUUCAAAUCGUAUUAUUG
- Length
- 68 nucleotides
- Bulged bases
- 9HM0|1|t|U|11, 9HM0|1|t|U|16, 9HM0|1|t|U|17, 9HM0|1|t|U|21, 9HM0|1|t|A|23, 9HM0|1|t|U|28, 9HM0|1|t|G|33, 9HM0|1|t|U|34, 9HM0|1|t|C|35, 9HM0|1|t|A|36, 9HM0|1|t|A|39, 9HM0|1|t|A|47, 9HM0|1|t|A|49, 9HM0|1|t|U|50, 9HM0|1|t|C|56, 9HM0|1|t|A|57
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9HM0|1|t|C|3
9HM0|1|t|A|4
9HM0|1|t|A|5
9HM0|1|t|U|6
9HM0|1|t|A|7
9HM0|1|t|U|8
9HM0|1|t|G|9
9HM0|1|t|A|10
9HM0|1|t|U|11
9HM0|1|t|G|12
9HM0|1|t|U|13
9HM0|1|t|A|14
9HM0|1|t|A|15
9HM0|1|t|U|16
9HM0|1|t|U|17
9HM0|1|t|G|18
9HM0|1|t|G|19
9HM0|1|t|U|20
9HM0|1|t|U|21
9HM0|1|t|A|22
9HM0|1|t|A|23
9HM0|1|t|C|24
9HM0|1|t|A|25
9HM0|1|t|U|26
9HM0|1|t|U|27
9HM0|1|t|U|28
9HM0|1|t|U|29
9HM0|1|t|A|30
9HM0|1|t|G|31
9HM0|1|t|G|32
9HM0|1|t|G|33
9HM0|1|t|U|34
9HM0|1|t|C|35
9HM0|1|t|A|36
9HM0|1|t|U|37
9HM0|1|t|G|38
9HM0|1|t|A|39
9HM0|1|t|C|40
9HM0|1|t|C|41
9HM0|1|t|U|42
9HM0|1|t|A|43
9HM0|1|t|A|44
9HM0|1|t|U|45
9HM0|1|t|U|46
9HM0|1|t|A|47
9HM0|1|t|U|48
9HM0|1|t|A|49
9HM0|1|t|U|50
9HM0|1|t|A|51
9HM0|1|t|C|52
9HM0|1|t|G|53
9HM0|1|t|U|54
9HM0|1|t|U|55
9HM0|1|t|C|56
9HM0|1|t|A|57
9HM0|1|t|A|58
9HM0|1|t|A|59
9HM0|1|t|U|60
9HM0|1|t|C|61
9HM0|1|t|G|62
9HM0|1|t|U|63
9HM0|1|t|A|64
9HM0|1|t|U|65
9HM0|1|t|U|66
9HM0|1|t|A|67
9HM0|1|t|U|68
9HM0|1|t|U|69
9HM0|1|t|G|70
Current chains
- Chain t
- E/E-site formyl-methionine tRNA
Nearby chains
- Chain AA
- Large subunit ribosomal RNA; LSU rRNA
- Chain I
- Small ribosomal subunit protein uS9m
- Chain S
- Small ribosomal subunit protein uS19m
- Chain XX
- Large ribosomal subunit protein bL33m
- Chain r
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: