HL_9HUS_010

3D structure

PDB id

9HUS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli ribosome with complexed filament nascent chain at length 31, with P-site tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CAACCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9HUS_010 not in the Motif Atlas

Geometric match to HL_8B0X_039

Geometric discrepancy: 0.1169

The information below is about HL_8B0X_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_63151.1

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

2

Unit IDs

9HUS|1|b|C|225
9HUS|1|b|A|226
9HUS|1|b|A|227
9HUS|1|b|C|228
9HUS|1|b|C|229
9HUS|1|b|G|230

Current chains

Chain b

23S rRNA

Nearby chains

Chain l

Large ribosomal subunit protein uL15