HL_9HUS_056
3D structure
- PDB id
- 9HUS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of WT E.coli ribosome with complexed filament nascent chain at length 31, with P-site tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CUGGGGCGG
- Length
- 9 nucleotides
- Bulged bases
- 9HUS|1|b|G|2250
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9HUS_056 not in the Motif Atlas
- Homologous match to HL_7A0S_052
- Geometric discrepancy: 0.2546
- The information below is about HL_7A0S_052
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_11974.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 17
Unit IDs
9HUS|1|b|C|2248
9HUS|1|b|U|2249
9HUS|1|b|G|2250
9HUS|1|b|G|2251
9HUS|1|b|G|2252
9HUS|1|b|G|2253
9HUS|1|b|C|2254
9HUS|1|b|G|2255
9HUS|1|b|G|2256
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain m
- 50S ribosomal protein L16
- Chain v
- Transfer RNA; tRNA
- Chain y
- Large ribosomal subunit protein bL27
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