HL_9HY6_056
3D structure
- PDB id
- 9HY6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome with nascent chain at linker length of 31 amino acids, with mRNA, P-site and A-site tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GUGAAGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 9HY6|1|b|A|2030, 9HY6|1|b|A|2031, 9HY6|1|b|G|2032
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9HY6_056 not in the Motif Atlas
- Homologous match to HL_7A0S_049
- Geometric discrepancy: 0.2492
- The information below is about HL_7A0S_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78372.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
9HY6|1|b|G|2027
9HY6|1|b|U|2028
9HY6|1|b|G|2029
9HY6|1|b|A|2030
9HY6|1|b|A|2031
9HY6|1|b|G|2032
9HY6|1|b|A|2033
9HY6|1|b|U|2034
9HY6|1|b|G|2035
9HY6|1|b|C|2036
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 3
- Large ribosomal subunit protein bL32
- Chain d
- 50S ribosomal protein L3
- Chain r
- Large ribosomal subunit protein bL21
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