HL_9HY6_065
3D structure
- PDB id
- 9HY6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome with nascent chain at linker length of 31 amino acids, with mRNA, P-site and A-site tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- UGAAUGGAAG
- Length
- 10 nucleotides
- Bulged bases
- 9HY6|1|b|A|2406
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9HY6_065 not in the Motif Atlas
- Homologous match to HL_7A0S_058
- Geometric discrepancy: 0.2306
- The information below is about HL_7A0S_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_51853.2
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
9HY6|1|b|U|2404
9HY6|1|b|G|2405
9HY6|1|b|A|2406
9HY6|1|b|A|2407
9HY6|1|b|U|2408
9HY6|1|b|G|2409
9HY6|1|b|G|2410
9HY6|1|b|A|2411
9HY6|1|b|A|2412
9HY6|1|b|G|2413
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain l
- Large ribosomal subunit protein uL15
Coloring options: