HL_9HY6_077
3D structure
- PDB id
- 9HY6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome with nascent chain at linker length of 31 amino acids, with mRNA, P-site and A-site tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CGUUCGGGACG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9HY6_077 not in the Motif Atlas
- Homologous match to HL_5IB8_208
- Geometric discrepancy: 0.2902
- The information below is about HL_5IB8_208
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_14063.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
9HY6|1|v|C|31
9HY6|1|v|G|32
9HY6|1|v|U|33
9HY6|1|v|U|34
9HY6|1|v|C|35
9HY6|1|v|G|36
9HY6|1|v|G|37
9HY6|1|v|G|38
9HY6|1|v|A|39
9HY6|1|v|C|40
9HY6|1|v|G|41
Current chains
- Chain v
- pro-tRNA
Nearby chains
- Chain X
- mRNA
- Chain b
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: