HL_9HYM_073

3D structure

PDB id

9HYM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli ribosome with complexed filament nascent chain at length 34, with mRNA, P-site and A-site tRNAs, and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CUUUAAG

Length

7 nucleotides

Bulged bases

9HYM|1|b|U|2797, 9HYM|1|b|A|2800

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9HYM_073 not in the Motif Atlas

Geometric match to HL_9AXU_012

Geometric discrepancy: 0.3588

The information below is about HL_9AXU_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13184.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

8

Unit IDs

9HYM|1|b|C|2795
9HYM|1|b|U|2796
9HYM|1|b|U|2797
9HYM|1|b|U|2798
9HYM|1|b|A|2799
9HYM|1|b|A|2800
9HYM|1|b|G|2801

Current chains

Chain b

23S rRNA

Nearby chains