HL_9I14_052
3D structure
- PDB id
- 9I14 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF HCT15 POLYSOMES IN HYBRID-PRE STATE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.34 Å
Loop
- Sequence
- CUGGGGCGG
- Length
- 9 nucleotides
- Bulged bases
- 9I14|1|L5|G|4195
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9I14_052 not in the Motif Atlas
- Homologous match to HL_8GLP_059
- Geometric discrepancy: 0.0649
- The information below is about HL_8GLP_059
- Detailed Annotation
- LSU P loop
- Broad Annotation
- LSU P loop
- Motif group
- HL_11974.5
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 21
Unit IDs
9I14|1|L5|C|4193
9I14|1|L5|U|4194
9I14|1|L5|G|4195
9I14|1|L5|G|4196
9I14|1|L5|G|4197
9I14|1|L5|G|4198
9I14|1|L5|C|4199
9I14|1|L5|G|4200
9I14|1|L5|G|4201
Current chains
- Chain L5
- LSU 28S rRNA
Nearby chains
- Chain LI
- 60S ribosomal protein L10
- Chain Lb
- 60S ribosomal protein L29
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